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Type: Course

[FRB-CESAB] Data Toolbox for Reproducible Research in Computational Ecology – 2022

 
The CESAB – Centre for Biodiversity Synthesis and Analysis – and the GdR EcoStat organize the fourth edition of the training course “Data Toolbox for Reproducible Research in Computational Ecology”. The objective of this five-day course is to train young researchers in reproducibility, software development and version management tools (Git, R Markdown, renv, Docker), applied to biodiversity research. The RStudio IDE will be used throughout the training.

 

This training will be given in French and will take place from November 28 to December 2, 2022 at CESAB in Montpellier. Its price is 200 € for the week – lunch included. Transportation, accommodation and evening meals are at the charge of the participants.

 

The GdR EcoStat offers financial support to those whose funds available through the supervisor/laboratory would not be sufficient. These scholarships are primarily intended for PhD students and post-doctoral fellows. In order to benefit from these grants, the participant must belong to a laboratory member of the GdR. The amount of the financial support granted will depend on the number of applications. 

 

 

Find the training course on GitHub

 

 

List of speakers (in alphabetical order):
  • Iago BONNICI (CNRS ISEM)
  • Nicolas CASAJUS (FRB-CESAB)
  • François GUILHAUMON (IRD Entropie)
  • Aurélie SIBERCHICOT (UCBL LBBE)

[FRB-CESAB] Biodiversity knowledge synthesis: an introduction to meta-analyses and systematic reviews – 2022

The CESAB – Centre for Biodiversity Synthesis and Analysis – of the FRB is offering the first edition of the following training course: “Biodiversity knowledge synthesis: an introduction to meta-analyses and systematic reviews“. This five-day course aims to train young researchers on the methods and techniques of meta-analyses and systematic reviews/maps applied to the field of biodiversity.

 

In addition, it will be an opportunity to become familiar with the various  different tools available, both bibliographic (e.g., WOS; Zotero/Mendeley/Endnote) and statistical (R packages: metaDigisitise, metafor…), necessary for undertaking a review and meta-analysis.

 

The training course will be given in French and will take place from 3 to 7 October 2022 at CESAB, in Montpellier. The price will be 350 € for the week, including lunch. Travel, accommodation and evening meals are at the expense of the participants. 

 

 

Find the training course on GitHub

 

 

Proficiency in R software is required but no experience in meta-analysis or systematic review is necessary.

 

List of organizers (by alphabetical order):

 

Other speakers: Dakis-Yaoba OUEDRAOGO, Romain SORDELLO, Frédéric GOSSELIN.

[FRB-CESAB] Theory-driven Analysis of Ecological Data – 2022

 

The CESAB – Centre for Biodiversity Synthesis and Analysis – and the GdR TheoMoDive organize the first edition of the training course “Theory-driven Analysis of Ecological Data”. The objective of this five-day course is to train young researchers in analyzing ecological data using theory-driven approaches. 

 

The training course, in English, will take place from the 16th to the 20th of May 2022 in the CESAB premises in Montpellier. Price is 150 € for the week, including lunch. Travel, accommodation and evening meals are at the expense of the participants. 

 

 

Find the training course on GitHub

 

 

A good knowledge of the R software is required.

 

List of organizers (by alphabetical order):
  • Vincent CALCAGNO (INRAE, ISA) 
  • Emanuel FRONHOFER (CNRS, Isem)
  • Isabelle GOUNAND (CNRS, iEES-Paris) 
  • François MASSOL (CNRS, CIIL) 

 

Others speakers: Matthieu BARBIER, Maxime DUBART, Claire JACQUET, Benjamin ROSENBAUM.

[FRB-CESAB] Data Toolbox for Reproducible Research in Computational Ecology – 2021

The CESABand the GdR EcoStat organize the third edition of the training course “Data Toolbox for Reproducible Research in Computational Ecology“. The objective of this five-day course is to train young researchers in reproducibility, software development and version management tools (e.g. R, git, markdown, tidyverse, docker), applied to biodiversity research.

 

Price is 300 € for the week, including lunch. Travel, accommodation and evening meals are at the expense of the participants. Grants may be awarded to some participants (for an amount not exceeding the registration fee): one grant from the FRB and one grant from the GdR EcoStat (for students belonging to a laboratory member of the GdR). The training course, in French, took place from the 29th of November to the 3rd of December 2021 in the CESAB premises in Montpellier. 

 

The training course can be credited for students registered in the following doctoral schools:

  • GAIA (Montpellier)
  • EGAAL (Rennes)
  • ABIES (Paris)
  • Sciences and agrosciences (Avignon)
  • SEVAB (Toulouse) 
  • Sciences de l’environnement (Aix en Provence)
 
List of speakers (in alphabetical order):
  • Nicolas CASAJUS (FRB-CESAB)
  • Stéphane DRAY (CNRS LBBE)
  • Olivier GIMENEZ (CNRS Cefe)
  • Loreleï GUÉRY (CIRAD PHIM)
  • François GUILHAUMON (IRD Marbec)
  • Nina SCHIETTEKATTE (EPHE Criobe)

[FRB-CESAB] Data Toolbox for Reproducible Research in Computational Ecology – 2020

The CESAB and the GDR EcoStat organize the second edition of the training course “Data Toolbox for Reproducible Research in Computational Ecology“. The objective of this five-day course, in French, is to train young researchers in reproducibility, software development and version management tools (e.g. R, git, markdown, tidyverse, docker), applied to biodiversity research.

The registration fee is 100 € for the week and will be used to compensate the speakers. Students from laboratories member of the GDR EcoStat can apply for financial support from the GDR.

 

 

The training course took place from 2 to 6 November 2020.

 

 

 

You can access the training course’s slides as well as the R codes. 

 

List of speakers (in alphabetical order):

  • Nicolas CASAJUS (FRB-CESAB)
  • Stéphane DRAY (CNRS LBBE)
  • Olivier GIMENEZ (CNRS Cefe)
  • François GUILHAUMON (IRD Marbec)
  • Nina SCHIETTEKATTE (EPHE Criobe)

 

[FRB-CESAB] Data Toolbox for Reproducible Research in Computational Ecology – 2019

The CESAB and the GDR EcoStat organize the training course “Data toolbox for reproducible research in computational ecology“. The objective of this five-day training is to train young researchers in reproducibility, software development and version management tools (e.g. R, git, markdown, tidyverse, docker), applied to biodiversity research.

 

 

The training course will take place from 2 to 6 December 2019 in the CESAB premises in Montpellier. The course will be in French. Price is 350 € for the week, including lunch. Travel, accommodation and evening meals will be at the expense of the participants. Students from laboratories member of the GDR EcoStat may apply for financial support from the GDR.

 
 
 
List of speakers (in alphabetical order):
  • Nicolas CASAJUS (FRB-CESAB)
  • Stéphane DRAY (CNRS LBBE)
  • Olivier GIMENEZ (CNRS Cefe)
  • Loreleï GUÉRY (IRD Marbec)
  • François GUILHAUMON (IRD Marbec)
  • Nina SCHIETTEKATTE (Criobe)